dcBuildInfoDataFrame is supposed to build an object of of the S4
InfoDataFrame, given an input file. This input file
can, for example, contain the domain information.
dcBuildInfoDataFrame(input.file, output.file = "InfoDataFrame.RData")
Any use-specified variable that is given on the right side of the
assigement sign '<-', which contains the built
Also, an RData file specified in "output.file" is saved in the local
If there are no use-specified variable that is given on the right side of the assigement sign '<-', then no object will be loaded onto the working environment.
# build an "InfoDataFrame" object that contains information on InterPro domains (InterPro) InterPro <- dcBuildInfoDataFrame(input.file="http://dcgor.r-forge.r-project.org/data/InterPro/InterPro.txt", output.file="InterPro.RData")An object of S4 class 'InfoDataFrame' has been built and saved into '/Users/hfang/Sites/SUPERFAMILY/dcGO/dcGOR/InterPro.RData'.InterProAn object of S4 class 'InfoDataFrame' rowNames: IPR000003 IPR000006 IPR000008 ... IPR029784 IPR029785 (11638 total) colNames: id level description